Insertion junction: CLIP2.001703_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001703
Chromosome:chromosome 2
Location:7088385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390060 RAA4 psaA mRNA trans-splicing factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCCCCTGGCCTAAGCCCTGCCGAGATGGGAAGCGGGGGCTTTCGG
Internal bar code:GCACAGTGCGATAGGATGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5876
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGCCTCCACCATAAGC
Suggested primer 2:ACACAGGTCATTTCGGCGAT