Gene: Cre09.g390060

Overview

Common name:RAA4
Defline:psaA mRNA trans-splicing factor
Description:Necessary for trans-splicing of psaA mRNA; no similarity to known proteins; component psaA trans-splicing sub complex I
Synonyms:g9658.t1
Chromosome:chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5)

Protein Localization

A plasmid for expressing Cre09.g390060 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre09.g390060-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001703_1 CLIP2.001703 CDS 80 6.1
CLIP2.001703_2 CLIP2.001703 CDS 80 6.1
CLIP2.002869_1 CLIP2.002869 CDS 80 6.1
CLIP2.002869_2 CLIP2.002869 CDS 80 6.1
CLIP2.003603_1 CLIP2.003603 intron 80 6.1
CLIP2.003603_2 CLIP2.003603 intron 80 6.1
CLIP2.003708_1 CLIP2.003708 outside_mRNA 80 6.1
CLIP2.003708_2 CLIP2.003708 outside_mRNA 80 6.1
CLIP2.004520_1 CLIP2.004520 3'UTR 80 6.1
CLIP2.004520_2 CLIP2.004520 3'UTR 80 6.1
CLIP2.007567_1 CLIP2.007567 CDS 80 6.1
LMJ.RY0402.113250_1 LMJ.RY0402.113250 3'UTR 95 5.5
LMJ.RY0402.113250_2 LMJ.RY0402.113250 3'UTR 95 5.5
LMJ.RY0402.119034_1 LMJ.RY0402.119034 3'UTR 95 5.5
LMJ.RY0402.119034_2 LMJ.RY0402.119034 3'UTR 95 5.5
LMJ.RY0402.119034_3 LMJ.RY0402.119034 3'UTR 95 5.5
LMJ.RY0402.133039_1 LMJ.RY0402.133039 3'UTR 95 5.5
LMJ.RY0402.133039_2 LMJ.RY0402.133039 3'UTR 95 5.5
LMJ.RY0402.155820_1 LMJ.RY0402.155820 intron 73 5.5
LMJ.RY0402.236851_1 LMJ.RY0402.236851 3'UTR 73 5.5

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.