Insertion junction: CLIP2.004520_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004520
Chromosome:chromosome 2
Location:7092063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390060 RAA4 psaA mRNA trans-splicing factor 3'UTR
Cre09.g390097 (1 of 112) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGAAGGACTGGCAGGAGCTCACACAAAGCACGAAGGACCCTCCCGT
Internal bar code:CTGTTCAGACAGTCATGCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1624
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGATGTATCAAACGCC
Suggested primer 2:GCGACACTACACAAGGGACA