Insertion junction: CLIP2.003603_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003603
Chromosome:chromosome 2
Location:7089117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390060 RAA4 psaA mRNA trans-splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGATGACACAGCCAGCCACACCGCCGGTGTTTCGCTAGCTGTCGAGGT
Internal bar code:TACCACTGGGGCGTCACGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GAGACTACATGCCCGTCTGG
Suggested primer 2:GGCGACCATCTTCTGCTACA