Insertion junction: CLIP2.007567_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007567
Chromosome:chromosome 2
Location:7091437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390060 RAA4 psaA mRNA trans-splicing factor CDS
Cre09.g390097 (1 of 112) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGACAGAGCGGCTGGTGGCGCCGGAGAGGTCTTCGGATGCGGAGGCA
Internal bar code:AAAAGCATACGGCATACGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3482
LEAP-Seq percent confirming:92.7419
LEAP-Seq n confirming:115
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCCCAACAAATGTTCA
Suggested primer 2:CCTTTCTTCTCGCTGGAGGC