Insertion junction: CLIP2.001706_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001706
Chromosome:chromosome 7
Location:4634329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344550 (1 of 3) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTCTTGGTGCCAAACCGAGGGGGTGGGACCGAGTCTCGCCAGGCC
Internal bar code:ATACGGCTGGCGAGTATGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTTGGACATGTGGACA
Suggested primer 2:GCTGGTTTAGTTTGCGTGCA