Insertion junction: CLIP2.001713_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001713
Chromosome:chromosome 1
Location:6833774
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049000 PTD1,RAF2,CGL31 (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGCTGAGGTCGTGGCGCAGCTGTGCACCAAGTCCCTGGGTGCGTCCA
Internal bar code:TATTCATCGTCTGCAATTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2719
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCGCGGCCCTATTACT
Suggested primer 2:GCGTGGTCAGCATAGCATTG