Gene: Cre01.g049000
Overview
| Common name: | PTD1,RAF2,CGL31 |
| Defline: | (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic |
| Description: | Conserved in the Green Lineage |
| Synonyms: | Cre01.g049000.t1.1,CGL31,PTD1,g1087.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_LW09B11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
shapes in cytoplasm/a few small crescent structures in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001713_1 | CLIP2.001713 | CDS | 80 | 6.1 |
| CLIP2.001713_2 | CLIP2.001713 | CDS | 80 | 6.1 |
| CLIP2.003993_1 | CLIP2.003993 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.084509_1 | LMJ.RY0402.084509 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.185074_1 | LMJ.RY0402.185074 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.239887_1 | LMJ.RY0402.239887 | 3'UTR | 58 | 5.5 |
Gene Annotations
| PFAM: | PF01329 |
| PANTHER: | PTHR12599 PTHR12599:SF8 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG4073 |
| Gene ontology terms:: | GO:0006729, GO:0008124 |
| Best arabidopsis TAIR name: | AT5G51110 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Transcriptional coactivator/pterin dehydratase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.