Insertion junction: LMJ.RY0402.185074_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185074
Chromosome:chromosome 1
Location:6799519
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g049000 PTD1,RAF2,CGL31 (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGCCATGCCTGCAGCGGCAACTGCAT
Internal bar code:CTGCCTCATCCCGTGCAACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:99.7728
LEAP-Seq n confirming:2635
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCGTGTCAGAAGAAGGG
Suggested primer 2:CGTACTTCATCGCTCGAACA