Insertion junction: LMJ.RY0402.239887_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.239887
Chromosome:chromosome 1
Location:6799484
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g049000 PTD1,RAF2,CGL31 (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAAATGCATCATACACGTGCTATCACGT
Internal bar code:TTTGCCGTACGTGGTGTTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:99.6241
LEAP-Seq n confirming:1060
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACTTCATCGCTCGAACA
Suggested primer 2:GAAGCGTGTCAGAAGAAGGG