Insertion junction: CLIP2.003993_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003993
Chromosome:chromosome 1
Location:6834417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049000 PTD1,RAF2,CGL31 (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACATGTCCGGAAGCCCGGAAAATCGGGGGCCTGCATTCTGCAGGCT
Internal bar code:AGTACGAGTTAAATTGAATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3838
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGCTCGAACAACACCA
Suggested primer 2:GCGGGTATGCCGTCTATGAA