Insertion junction: LMJ.RY0402.084509_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084509
Chromosome:chromosome 1
Location:6799348
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g049000 PTD1,RAF2,CGL31 (1 of 1) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE // SUBFAMILY NOT NAMED; RuBisCO assembly chaperone, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGGTAAAGGAGTGCAGGCTAGCACTG
Internal bar code:GGTTGGCTCTTGGTTGATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:740
LEAP-Seq percent confirming:99.5824
LEAP-Seq n confirming:4292
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCATTGCTTGCTGGTC
Suggested primer 2:CGTACTTCATCGCTCGAACA