Insertion junction: CLIP2.001740_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001740
Chromosome:chromosome 12
Location:4402573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519850 (1 of 1) K11549 - kinetochore protein Spc24, animal type (SPBC24, SPC24) 3'UTR
Cre12.g519900 (1 of 1) 6.3.2.13 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase / UDP-N-acetylmuramyl-tripeptide synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCCCAACTGGCAACGCTCCTCCTGCTCCTCCACCACCGCAACTGC
Internal bar code:TGGGCCTGTGCGCCTAAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5215
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACGGCTGCTTCTATCTA
Suggested primer 2:AAGCTGCATACCTGGACCAC