Insertion junction: CLIP2.001779_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001779
Chromosome:chromosome 5
Location:2182437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237400 DAE1 (1 of 1) 5.1.1.7 - Diaminopimelate epimerase; Diaminopimelate epimerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTAGCTTGCCCTGAAGCCTCCGCTCACCGGCCAGGGTGTGGATCTTGT
Internal bar code:TCCTGGGGTAACCAATAGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGCGCTGATGAGGTTCA
Suggested primer 2:AGGCTCGCCGGAAACAATAA