Insertion junction: CLIP2.001803_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001803
Chromosome:chromosome 16
Location:2333031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659050 (1 of 1) 4.2.99.20 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / SHCHC synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCAGCCCCACGCCCGCCGCCGCCGCCGCCGCCCCGAACGCCGCCGCCG
Internal bar code:TGGGGAGTTCCCACGGTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1724
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAACCTCCTCCTCCTCA
Suggested primer 2:AGCACGTAAGAACATGGGCA