Insertion junction: CLIP2.001811_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001811
Chromosome:chromosome 16
Location:3629205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674534 (1 of 1) IPR012336//IPR013026//IPR013105//IPR019734 - Thioredoxin-like fold // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 2 // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCAGCGATTGTCGGTGAGCTCTGAAATGGTGAAGCCCGTAGCCATTC
Internal bar code:GGGATTCTTGAAGGAACGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGATTGTAGCACCTGCATG
Suggested primer 2:GTTGGATGCCTACTGTGCCT