Gene: Cre16.g674534
Overview
| Common name: | |
| Defline: | (1 of 1) IPR012336//IPR013026//IPR013105//IPR019734 - Thioredoxin-like fold // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 2 // Tetratricopeptide repeat |
| Description: | |
| Synonyms: | g16126.t1,Cre01.g063300.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g674534 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g674534-Venus-3xFLAG
Imaged strain: CSI_LW10G2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001811_1 | CLIP2.001811 | intron | 80 | 6.1 |
| CLIP2.001811_2 | CLIP2.001811 | intron | 80 | 6.1 |
| CLIP2.004311_1 | CLIP2.004311 | intron | 80 | 6.1 |
| CLIP2.006317_1 | CLIP2.006317 | CDS | 80 | 6.1 |
| CLIP2.007155_1 | CLIP2.007155 | intron | 80 | 6.1 |
| CLIP2.007155_2 | CLIP2.007155 | intron | 80 | 6.1 |
| CLIP2.007451_1 | CLIP2.007451 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.090421_1 | LMJ.RY0402.090421 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.104426_1 | LMJ.RY0402.104426 | intron | 95 | 5.5 |
| LMJ.RY0402.104426_2 | LMJ.RY0402.104426 | intron | 95 | 5.5 |
| LMJ.RY0402.123523_1 | LMJ.RY0402.123523 | intron | 95 | 5.5 |
| LMJ.RY0402.123523_2 | LMJ.RY0402.123523 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF07719, PF13414 |
| PANTHER: | PTHR22904 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT3G17670 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | tetratricopeptide repeat (TPR)-containing protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.