Insertion junction: LMJ.RY0402.090421_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.090421
Chromosome:chromosome 16
Location:3485002
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g674534 (1 of 1) IPR012336//IPR013026//IPR013105//IPR019734 - Thioredoxin-like fold // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 2 // Tetratricopeptide repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTGGGACTTGCGCGCCGTCAGGCTTT
Internal bar code:TCGCCGGTAGAGTTTCGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:98.607
LEAP-Seq n confirming:1982
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCGACACTGAATGGCTG
Suggested primer 2:TTAAGACCTTCGGCCTGAGA