Insertion junction: CLIP2.004311_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004311
Chromosome:chromosome 16
Location:3628702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674534 (1 of 1) IPR012336//IPR013026//IPR013105//IPR019734 - Thioredoxin-like fold // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 2 // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACAAGAAGGCACAGTCCTCAAAGCAGGGGCGCACCGCACAGGGTTGC
Internal bar code:AATTGATACCATAGGCTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2417
LEAP-Seq percent confirming:88.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTCACATTGTGATCCGCT
Suggested primer 2:GTATCTCCGAGGTCAAGGCG