Insertion junction: CLIP2.001820_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001820
Chromosome:chromosome 12
Location:59208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483700 RBP40,RB38 Chloroplast-targeted RNA-binding protein; (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACGCATGCAGGGGTGCGCGGCCATAATAAGGGGCCGTGGCAAGTGC
Internal bar code:TTTGCGGGGAGGTCATTACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5477
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCAATTTGCTGTGCCTGC
Suggested primer 2:TAGGGACTTGGGATCAGGGG