Gene: Cre12.g483700
Overview
| Common name: | RBP40,RB38 |
| Defline: | Chloroplast-targeted RNA-binding protein; (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED |
| Description: | RNA-binding protein of 38 kDa, OSB/PTAC9 homolog; targeted to chloroplast; homology to DUF731 proteins of unknown function found in plants; has been reported to bind the psbA mRNA, or to the psbD mRNA in association with NAC2 |
| Synonyms: | RB38,RBP40,g12006.t2 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g483700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g483700-Venus-3xFLAG
Imaged strain: CSI_LW05H3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/a few small crescent structures in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001820_1 | CLIP2.001820 | 3'UTR | 80 | 6.1 |
| CLIP2.006494_1 | CLIP2.006494 | intron | 80 | 6.1 |
| LMJ.RY0402.172902_1 | LMJ.RY0402.172902 | 3'UTR|outside_mRNA | 73 | 5.5 |
| LMJ.RY0402.181396_1 | LMJ.RY0402.181396 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.198750_1 | LMJ.RY0402.198750 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.239950_4 | LMJ.RY0402.239950 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | PTHR10302 PTHR10302:SF8 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0003697, GO:0006260 |
| Best arabidopsis TAIR name: | AT5G44785 |
| Best arabidopsis TAIR symbol: | OSB3 |
| Best arabidopsis TAIR defline: | organellar single-stranded DNA binding protein 3 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.