Insertion junction: CLIP2.001832_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001832
Chromosome:chromosome 10
Location:2940221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440000 RAA8,OPR120 psaA mRNA trans-splicing factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCTGCTAGCCGTGGCAGCAGCCGGCACAGCTCGCCACACGAGGGCGG
Internal bar code:AGCGGCCTTTATCGTATATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:5834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGCGTGTCTGGACAT
Suggested primer 2:TGCTGCTACTGGTGCTACTG