| Common name: | RAA8,OPR120 |
| Defline: | psaA mRNA trans-splicing factor |
| Description: | OctotricoPeptide (octotricoPeptide) Repeat (OPR) Protein; necessary for trans-splicing of psaA mRNA; mutated in strain F19; component psaA trans-splicing sub complex I |
| Synonyms: | g10832.t1,OPR120 |
| Chromosome: | chromosome 10 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001832_1 | CLIP2.001832 | CDS | 80 | 6.1 |
| CLIP2.001832_2 | CLIP2.001832 | CDS | 80 | 6.1 |
| CLIP2.002700_1 | CLIP2.002700 | intron | 80 | 6.1 |
| CLIP2.002700_2 | CLIP2.002700 | intron | 80 | 6.1 |
| CLIP2.003423_1 | CLIP2.003423 | CDS | 80 | 6.1 |
| CLIP2.003423_2 | CLIP2.003423 | CDS | 80 | 6.1 |
| CLIP2.005552_1 | CLIP2.005552 | CDS | 80 | 6.1 |
| CLIP2.005552_2 | CLIP2.005552 | CDS | 80 | 6.1 |
| CLIP2.007126_1 | CLIP2.007126 | CDS | 80 | 6.1 |
| CLIP2.007126_2 | CLIP2.007126 | CDS | 80 | 6.1 |
| LMJ.RY0402.145067_1 | LMJ.RY0402.145067 | intron | 73 | 5.5 |
| LMJ.RY0402.151298_1 | LMJ.RY0402.151298 | intron | 73 | 5.5 |
| LMJ.RY0402.252508_1 | LMJ.RY0402.252508 | CDS | 95 | 5.5 |
| LMJ.RY0402.252508_2 | LMJ.RY0402.252508 | CDS | 95 | 5.5 |
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| High light, screen 2 of 2 ( 82% confidence (FDR = 0.18)) |
| Photosynthesis, screen 1 of 5 ( 78% confidence (FDR = 0.22)) |
| Photosynthesis, screen 4 of 5 ( 86% confidence (FDR = 0.14)) |
| Photosynthesis, screen 5 of 5 ( 96% confidence (FDR = 0.036)) |
| Photosynthesis or light sensitivity, screen 6 of 12 ( 92% confidence (FDR = 0.08)) |
| Photosynthesis or light sensitivity, screen 8 of 12 ( 88% confidence (FDR = 0.12)) |
| Photosynthesis or light sensitivity, screen 10 of 12 ( 86% confidence (FDR = 0.14)) |
| Photosynthesis or light sensitivity, screen 11 of 12 ( 86% confidence (FDR = 0.14)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.