Insertion junction: CLIP2.002700_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002700
Chromosome:chromosome 10
Location:2937374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440000 RAA8,OPR120 psaA mRNA trans-splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGTGTGTAAG
Internal bar code:GTGCGGCGGGTGCCGGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:628
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTTCCTGCTCCTGCTG
Suggested primer 2:GTGTGTGTGTCTCTGTCCCC