Insertion junction: CLIP2.005552_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005552
Chromosome:chromosome 10
Location:2934844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440000 RAA8,OPR120 psaA mRNA trans-splicing factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCTACTGCTGGAGCCCCTGCGGCAGCGCCTGAGGCAGCTGTCCAGA
Internal bar code:CCTTAGTTTTTTATGCAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3017
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCACCACGCCATCTTTCTCT
Suggested primer 2:GCACTGTGACTTAACACGCG