Insertion junction: CLIP2.002700_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002700
Chromosome:chromosome 10
Location:2937372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440000 RAA8,OPR120 psaA mRNA trans-splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACCTGGTCGCTCATCTCGAACAGCCGGTCCGGG
Internal bar code:GTGCGGCGGGTGCCGGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTCTCTGTCCCC
Suggested primer 2:TGTTCTTCCTGCTCCTGCTG