Insertion junction: CLIP2.001894_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001894
Chromosome:chromosome 3
Location:1452203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151200 CGLD16 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR36343:SF1 - EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCGTTTCCCCACATCACAATCCTTTACCCTCTCGGTGCCTCATTCA
Internal bar code:ACAGTATATCCTGCTTACTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCACATCATATACGGCGGCC
Suggested primer 2:TCGTTTCCGTGAAGGGTCTG