Gene: Cre03.g151200
Overview
| Common name: | CGLD16 |
| Defline: | Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR36343:SF1 - EXPRESSED PROTEIN |
| Description: | Chloroplast protein, co-migrates with PSII monomers and RC47 assembly intermediate ((doi: https://doi.org/10.1101/2021.01.04.425283 ) |
| Synonyms: | Cre03.g151200.t1.1,g3077.t1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g151200 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g151200-Venus-3xFLAG
Imaged strain: CSI_LW01D6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in thylakoid
cytosol/cytosol (weak signal)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001695_1 | CLIP2.001695 | intron | 80 | 6.1 |
| CLIP2.001695_2 | CLIP2.001695 | intron | 80 | 6.1 |
| CLIP2.001894_1 | CLIP2.001894 | intron | 80 | 6.1 |
| CLIP2.002648_1 | CLIP2.002648 | 3'UTR | 80 | 6.1 |
| CLIP2.002648_2 | CLIP2.002648 | 3'UTR | 80 | 6.1 |
| CLIP2.003648_1 | CLIP2.003648 | 3'UTR | 80 | 6.1 |
| CLIP2.003648_2 | CLIP2.003648 | 3'UTR | 80 | 6.1 |
| CLIP2.005570_1 | CLIP2.005570 | 3'UTR | 80 | 6.1 |
| CLIP2.005570_2 | CLIP2.005570 | 3'UTR | 80 | 6.1 |
| CLIP2.007308_1 | CLIP2.007308 | 3'UTR | 80 | 6.1 |
| CLIP2.007308_2 | CLIP2.007308 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.083752_1 | LMJ.RY0402.083752 | intron | 73 | 5.5 |
| LMJ.RY0402.254277_2 | LMJ.RY0402.254277 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | PTHR36343 PTHR36343:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G13500 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.