Insertion junction: LMJ.RY0402.083752_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.083752
Chromosome:chromosome 3
Location:1426545
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g151200 CGLD16 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR36343:SF1 - EXPRESSED PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTTGAAATGCAGTCACACGAAGCCAGG
Internal bar code:CCTTTTTGCCTCGCCTTCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:99.5459
LEAP-Seq n confirming:3946
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTGACAGTTCAGCGAAA
Suggested primer 2:ACGGACAGGTCAATGTAGCC