Insertion junction: CLIP2.007308_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007308
Chromosome:chromosome 3
Location:1451139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151200 CGLD16 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR36343:SF1 - EXPRESSED PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCGGATTGGTCCAAATGTAACTACAGCCCACAAATGCATTCAACAGGG
Internal bar code:CACTTATGCCGACAGTTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3093
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACGATAAGGCCACACGTGTT
Suggested primer 2:GTCGATAACTCCCTGAGCGG