Insertion junction: CLIP2.001925_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001925
Chromosome:chromosome 16
Location:6044977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678000 CPL22 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCTTTCGTGCGGTAGTGTGCATCATGTTCACTTCGTGAGGCATGACG
Internal bar code:AGACATAAATTGTGTTTAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1730
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAGAAGCAAGTACCTGC
Suggested primer 2:CGTGGAGCTAGGACGATGAC