Gene: Cre16.g678000
Overview
| Common name: | CPL22 |
| Defline: | (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Plant Lineage |
| Description: | |
| Synonyms: | g16555.t1,Cre16.g678000.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g678000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g678000-Venus-3xFLAG
Imaged strain: CSI_LW04B1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast envelope/not homogeneous/patches
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre16.g678000 | CPL22 | Cre02.g081250 | Wang et al. 2023 | |
| Cre16.g678000 | CPL22 | Cre06.g261800 | ADT1,PRD1 | Wang et al. 2023 |
| Cre16.g678000 | CPL22 | Cre07.g321800 | Wang et al. 2023 | |
| Cre16.g678000 | CPL22 | Cre10.g451600 | SRR28,SRR28B | Wang et al. 2023 |
| Cre16.g678000 | CPL22 | Cre10.g458350 | SRR16 | Wang et al. 2023 |
| Cre16.g678000 | CPL22 | Cre12.g512300 | Wang et al. 2023 | |
| Cre16.g678000 | CPL22 | Cre16.g654500 | EIF3F | Wang et al. 2023 |
| Cre16.g678000 | CPL22 | Cre16.g678000 | CPL22 | Wang et al. 2023 |
| Cre16.g678000 | CPL22 | Cre16.g682725 | GST2 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001925_1 | CLIP2.001925 | 3'UTR | 80 | 6.1 |
| CLIP2.001925_2 | CLIP2.001925 | 3'UTR | 80 | 6.1 |
| CLIP2.003102_1 | CLIP2.003102 | 3'UTR | 80 | 6.1 |
| CLIP2.003102_2 | CLIP2.003102 | 3'UTR | 80 | 6.1 |
| CLIP2.003981_1 | CLIP2.003981 | 3'UTR | 80 | 6.1 |
| CLIP2.003981_2 | CLIP2.003981 | 3'UTR | 80 | 6.1 |
| CLIP2.004486_1 | CLIP2.004486 | intron | 80 | 6.1 |
| CLIP2.004486_2 | CLIP2.004486 | intron | 80 | 6.1 |
| CLIP2.005493_1 | CLIP2.005493 | CDS | 80 | 6.1 |
| CLIP2.005493_2 | CLIP2.005493 | CDS | 80 | 6.1 |
| LMJ.RY0402.042245_1 | LMJ.RY0402.042245 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.106943_1 | LMJ.RY0402.106943 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.172082_1 | LMJ.RY0402.172082 | 5'UTR_intron | 95 | 5.5 |
| LMJ.RY0402.172082_2 | LMJ.RY0402.172082 | 5'UTR_intron | 95 | 5.5 |
| LMJ.RY0402.173155_1 | LMJ.RY0402.173155 | intron | 95 | 5.5 |
| LMJ.RY0402.173155_2 | LMJ.RY0402.173155 | intron | 95 | 5.5 |
| LMJ.RY0402.185660_1 | LMJ.RY0402.185660 | intron | 95 | 5.5 |
| LMJ.RY0402.185660_2 | LMJ.RY0402.185660 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF11891 |
| PANTHER: | PTHR31620 PTHR31620:SF5 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G08640 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Protein of unknown function (DUF3411) |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.