Insertion junction: LMJ.RY0402.106943_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.106943
Chromosome:chromosome 16
Location:5817266
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g678000 CPL22 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGACAAAGGCGAAGTACTTGGTACAC
Internal bar code:TTTCGAGGCGTAAGGAGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:99.5459
LEAP-Seq n confirming:4165
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTACAAGGCAGGAATGGC
Suggested primer 2:GGAGCTAGGACGATGACAGC