Insertion junction: LMJ.RY0402.172082_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.172082
Chromosome:chromosome 16
Location:5813647
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g678000 CPL22 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Plant Lineage 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGGCGCCGAACTCGACAAGAAAGTTTG
Internal bar code:GGTTTGCGACACTGCGCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:779
LEAP-Seq percent confirming:98.9362
LEAP-Seq n confirming:186
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAGTTTCCAAGGCTCGC
Suggested primer 2:CTCCTTGCACCTTAATGGGA