Insertion junction: CLIP2.001939_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001939
Chromosome:chromosome 12
Location:9606377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539650 (1 of 1) PF00530//PF08016 - Scavenger receptor cysteine-rich domain (SRCR) // Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGGATTAGGCGCGCACAAGTAAGCCCTGCACACCGACAACTCACCAC
Internal bar code:GAGGTCAAATAAATAACACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AATAACAACGGGCGCAGGTA
Suggested primer 2:CTACGACCCAAAACGAGCCT