Gene: Cre12.g539650

Overview

Common name:
Defline:	(1 of 1) PF00530//PF08016 - Scavenger receptor cysteine-rich domain (SRCR) // Polycystin cation channel (PKD_channel)
Description:
Synonyms:	g13782.t1
Chromosome:	chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.001541_1	CLIP2.001541	CDS	80	6.1
CLIP2.001541_2	CLIP2.001541	CDS	80	6.1
CLIP2.001939_1	CLIP2.001939	intron	80	6.1
CLIP2.001939_2	CLIP2.001939	intron	80	6.1
CLIP2.002615_1	CLIP2.002615	CDS	80	6.1
CLIP2.002615_2	CLIP2.002615	CDS	80	6.1
CLIP2.003244_1	CLIP2.003244	intron	80	6.1
CLIP2.003244_2	CLIP2.003244	intron	80	6.1
CLIP2.003451_1	CLIP2.003451	intron	80	6.1
CLIP2.003451_2	CLIP2.003451	intron	80	6.1
LMJ.RY0402.049225_1	LMJ.RY0402.049225	intron	95	5.5
LMJ.RY0402.049225_2	LMJ.RY0402.049225	intron	95	5.5
LMJ.RY0402.052554_1	LMJ.RY0402.052554	intron	73	5.5
LMJ.RY0402.105166_1	LMJ.RY0402.105166	intron	95	5.5
LMJ.RY0402.105166_2	LMJ.RY0402.105166	intron	95	5.5
LMJ.RY0402.112165_1	LMJ.RY0402.112165	intron	73	5.5
LMJ.RY0402.118421_2	LMJ.RY0402.118421	CDS	58	5.5
LMJ.RY0402.122061_1	LMJ.RY0402.122061	CDS	73	5.5
LMJ.RY0402.143737_1	LMJ.RY0402.143737	intron	73	5.5
LMJ.RY0402.154765_1	LMJ.RY0402.154765	CDS	73	5.5
LMJ.RY0402.176526_1	LMJ.RY0402.176526	CDS	73	5.5
LMJ.RY0402.182447_2	LMJ.RY0402.182447	CDS	73	5.5
LMJ.RY0402.210474_1	LMJ.RY0402.210474	CDS/intron	95	5.5
LMJ.RY0402.210474_2	LMJ.RY0402.210474	intron	95	5.5
LMJ.RY0402.211402_1	LMJ.RY0402.211402	intron	73	5.5
LMJ.RY0402.211402_2	LMJ.RY0402.211402	intron	73	5.5
LMJ.RY0402.211402_3	LMJ.RY0402.211402	intron	73	5.5
LMJ.RY0402.211478_1	LMJ.RY0402.211478	intron	95	5.5
LMJ.RY0402.211478_2	LMJ.RY0402.211478	intron	95	5.5
LMJ.RY0402.221508_2	LMJ.RY0402.221508	3'UTR	58	5.5

Gene Annotations

PFAM:	PF00530, PF08016
PANTHER:	PTHR19331
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005044, GO:0005199, GO:0016020
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Photosynthesis or light sensitivity, screen 6 of 12 ( 94% confidence (FDR = 0.057))

Photosynthesis or light sensitivity, screen 8 of 12 ( 78% confidence (FDR = 0.22))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.