Insertion junction: LMJ.RY0402.211478_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.211478
Chromosome:chromosome 12
Location:9465429
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g539650 (1 of 1) PF00530//PF08016 - Scavenger receptor cysteine-rich domain (SRCR) // Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGACCCAAAACGAGCCTCCAGAGCTGGG
Internal bar code:TTTTCTGATGAGTTTCTTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGAGGGCAAAGGTAA
Suggested primer 2:TGCCTGTGACGTGTCTTTTC