Insertion junction: LMJ.RY0402.143737_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.143737
Chromosome:chromosome 12
Location:9460549
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g539650 (1 of 1) PF00530//PF08016 - Scavenger receptor cysteine-rich domain (SRCR) // Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGAGCGAGTGCTACAGTAATTGTGTG
Internal bar code:GCTACTCGGACAACTGTTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:85.8044
LEAP-Seq n confirming:272
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTACATGAAGCCCCAA
Suggested primer 2:ACACACACACACACACACCG