Insertion junction: CLIP2.003244_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003244
Chromosome:chromosome 12
Location:9611438
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539650 (1 of 1) PF00530//PF08016 - Scavenger receptor cysteine-rich domain (SRCR) // Polycystin cation channel (PKD_channel) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAACCGCCATCCAGTGTGCCTAAGCCGCCCCCTTGCCCGCCTCCCCTTT
Internal bar code:AGTTCTCTAACATAACTTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGGTGTGAGCGAGTA
Suggested primer 2:CTCACCTACACCTGCCGTTC