Insertion junction: CLIP2.001967_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001967
Chromosome:chromosome 12
Location:2003272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510800 CHLI2 (1 of 2) PTHR32039//PTHR32039:SF9 - FAMILY NOT NAMED // MAGNESIUM-CHELATASE SUBUNIT CHLI-2, CHLOROPLASTIC; Magnesium chelatase subunit I, isoform 2 with histidine kinase activity intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACACAGAACCCGATAATAGCTCCCAGATCGCCAAGGGGTGAGGCGGG
Internal bar code:GCTTGTCTATACAGGAGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGACCGACCTTTCCCAACAT
Suggested primer 2:GGACGGGTGTAGGATAAGCG