Insertion junction: CLIP2.002008_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002008
Chromosome:chromosome 3
Location:4502245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGGGGGGAGGCGTGTGGCATCTCGGGTTGGCAAGCGGAAGACGGGGT
Internal bar code:AGTATGAAACTAAGTATGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAATTGGGGCTTTAGGC
Suggested primer 2:CCCCACTTCGCTTCACTTCT