Insertion junction: CLIP2.002012_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002012
Chromosome:chromosome 5
Location:3192938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232200 NDA3,LCI18 Mitochondrial NADH dehydrogenase; (1 of 1) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCCTCATTCTTCTGGGCGTTTGAATGGTTCTATTGTATTGTAAGTG
Internal bar code:CGGGGTGATCCAAATTTTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATTATCGGGTACTCGC
Suggested primer 2:ATCCAAGAGGTTGTCCAGCG