Gene: Cre05.g232200
Overview
| Common name: | NDA3,LCI18 |
| Defline: | Mitochondrial NADH dehydrogenase; (1 of 1) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT |
| Description: | NADH:quinone reductase (non-electrogenic) |
| Synonyms: | g5135.t1,LCI18,Cre05.g232200.t1.1,NDA3 |
| Chromosome: | chromosome 5 |
Protein Localization
A plasmid for expressing Cre05.g232200 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre05.g232200-Venus-3xFLAG
Imaged strain: CSI_LW08A6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre05.g232200 | NDA3,LCI18 | Cre02.g100950 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre03.g148050 | POLI1 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre03.g189250 | RAB11,RABA1 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre04.g226650 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre05.g232200 | NDA3,LCI18 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre05.g234645 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre07.g350100 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre10.g433050 | ARCS,DRP5B,ARC5,DRP8 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre12.g527100 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre12.g547351 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre13.g567750 | PRP18 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre13.g573450 | CPS | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre16.g673900 | RPC3 | Wang et al. 2023 |
| Cre05.g232200 | NDA3,LCI18 | Cre16.g677001 | Wang et al. 2023 | |
| Cre05.g232200 | NDA3,LCI18 | Cre17.g720000 | CCT9 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002012_1 | CLIP2.002012 | CDS | 80 | 6.1 |
| CLIP2.002012_2 | CLIP2.002012 | CDS | 80 | 6.1 |
| CLIP2.003823_1 | CLIP2.003823 | CDS | 80 | 6.1 |
| CLIP2.003823_2 | CLIP2.003823 | CDS | 80 | 6.1 |
| CLIP2.004511_1 | CLIP2.004511 | CDS | 80 | 6.1 |
| CLIP2.004511_2 | CLIP2.004511 | CDS | 80 | 6.1 |
| CLIP2.004837_1 | CLIP2.004837 | CDS | 80 | 6.1 |
| CLIP2.004837_2 | CLIP2.004837 | CDS | 80 | 6.1 |
| CLIP2.007555_1 | CLIP2.007555 | CDS | 80 | 6.1 |
| CLIP2.007555_2 | CLIP2.007555 | CDS | 80 | 6.1 |
| LMJ.RY0402.063057_1 | LMJ.RY0402.063057 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.139973_1 | LMJ.RY0402.139973 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.235538_1 | LMJ.RY0402.235538 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00070 |
| PANTHER: | PTHR22912 PTHR22912:SF180 |
| KEGG_ec: | EC:1.6.5.9 |
| KEGG_orthology: | K17871 |
| KOG: | KOG2495 |
| Gene ontology terms:: | GO:0016491, GO:0055114 |
| Best arabidopsis TAIR name: | AT4G21490 |
| Best arabidopsis TAIR symbol: | NDB2 |
| Best arabidopsis TAIR defline: | NAD(P)H dehydrogenase B3 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.