Gene: Cre13.g573450

Overview

Common name:	CPS
Defline:	Putative cleavage and polyadenylation specificity factor subunit 1; (1 of 1) K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1)
Description:	Contains MMS1_N and CPSF_A domains typical of U2 snRNP-associated protein Sap130
Synonyms:	g14099.t1,Cre13.g573450.t1.1,CPS
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre05.g232200	NDA3,LCI18	Cre13.g573450	CPS	Wang et al. 2023

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.008673_1	CLIP2.008673	intron	80	6.1
CLIP2.008673_2	CLIP2.008673	intron	80	6.1
CLIP2.010885_1	CLIP2.010885	intron	80	6.1
CLIP2.010885_2	CLIP2.010885	intron	80	6.1
CLIP2.011357_2	CLIP2.011357	intron	80	6.1
CLIP2.011357_3	CLIP2.011357	intron	80	6.1
CLIP2.022330_1	CLIP2.022330	intron	80	6.1
CLIP2.022330_2	CLIP2.022330	intron	80	6.1
CLIP2.027083_2	CLIP2.027083	intron	80	6.1
CLIP2.027083_3	CLIP2.027083	intron	80	6.1
CLIP2.077251_2	CLIP2.077251	CDS	63	6.1
CLIP2.078375_2	CLIP2.078375	intron	80	6.1
LMJ.RY0402.055440_1	LMJ.RY0402.055440	intron	95	5.5
LMJ.RY0402.055440_2	LMJ.RY0402.055440	intron	95	5.5
LMJ.RY0402.119940_1	LMJ.RY0402.119940	intron	95	5.5
LMJ.RY0402.119940_2	LMJ.RY0402.119940	intron	95	5.5
LMJ.RY0402.160316_1	LMJ.RY0402.160316	3'UTR	95	5.5
LMJ.RY0402.160316_2	LMJ.RY0402.160316	3'UTR	95	5.5
LMJ.RY0402.192294_1	LMJ.RY0402.192294	3'UTR	95	5.5
LMJ.RY0402.192877_4	LMJ.RY0402.192877	intron	73	5.5

Gene Annotations

PFAM:	PF03178, PF10433
PANTHER:	PTHR10644
KEGG_ec:
KEGG_orthology:	K14401
KOG:	KOG1896
Gene ontology terms::	GO:0003676, GO:0005634
Best arabidopsis TAIR name:	AT5G51660
Best arabidopsis TAIR symbol:	ATCPSF160,CPSF160
Best arabidopsis TAIR defline:	cleavage and polyadenylation specificity factor 160
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.