Insertion junction: CLIP2.027083_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027083
Chromosome:chromosome 13
Location:1611532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573450 CPS Putative cleavage and polyadenylation specificity factor subunit 1; (1 of 1) K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGATCGGGCTCAACAGTGCATCCCCCTCCTGCTGCTGCTCCATTCCT
Internal bar code:GCGGCGCGCCAGAGTGGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGACAATGCGCCTCTGAA
Suggested primer 2:TACACTTCCCTTCCACGCAC