Insertion junction: CLIP2.010885_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.010885
Chromosome:chromosome 13
Location:1620408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573450 CPS Putative cleavage and polyadenylation specificity factor subunit 1; (1 of 1) K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGAAATGCGAGCCGCCTCGCAGACTCGCATGGGCGAAGCCACTCAGCC
Internal bar code:CGGTAATTCGTCGGGGTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCAAGTGGCAGCAGTAG
Suggested primer 2:AAAGAAGGAGGAGCAAGGCG