Insertion junction: CLIP2.022330_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022330
Chromosome:chromosome 13
Location:1616452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573450 CPS Putative cleavage and polyadenylation specificity factor subunit 1; (1 of 1) K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGGCCAAACCGACGTCTCACAATATAGACAGAGGTGCGGCTCTTAGG
Internal bar code:CCGGCACAGTACCACAGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2809
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTCCTGCTCATCACCAT
Suggested primer 2:GGCTCGATGGGCATGTATGA