Insertion junction: CLIP2.004511_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004511
Chromosome:chromosome 5
Location:3195152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232200 NDA3,LCI18 Mitochondrial NADH dehydrogenase; (1 of 1) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGAAGTACCCGGCGCTCATGAAGTACGTCAAGGTCACGCTGCTGC
Internal bar code:CATTGTTCGGTTGGGGAAACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1618
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGCACTTGACGTCACG
Suggested primer 2:AGTACGACAAGGCTGTGGTG