Insertion junction: CLIP2.007555_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007555
Chromosome:chromosome 5
Location:3193744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232200 NDA3,LCI18 Mitochondrial NADH dehydrogenase; (1 of 1) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGGTTGTCCAGCGCGATGGCGGCAAAGGGGCGCTGGGGCGGCCATT
Internal bar code:CTGCATCACGTGGACTCCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCAATGTTGCTTCACCG
Suggested primer 2:GGAGCAACCGCAACAGAAAG