Insertion junction: CLIP2.004837_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004837
Chromosome:chromosome 5
Location:3194315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232200 NDA3,LCI18 Mitochondrial NADH dehydrogenase; (1 of 1) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACGTGTCCGTGTCAATGACCTGCACGCAGCCAGCACACACCAAAAAC
Internal bar code:CGGGTAAACGTCTGGCGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1642
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGCGCGTTTCTAATCCC
Suggested primer 2:ACCACAGCCTTGTCGTACTG